fixed `concatenate_miso.py` to work with non-downsampled miso files.
added GENOME environment variable for new GATK util
working on sailfish. not done yet
working on sailfish. not done yet
added gentle RNAseq analysis that doesn't make bigwig
updated bashrc
added gentle RNAseq analysis that doesn't make bigwig
declaring variables is lame
update sailfish_quant
update sailfish_quant, mucking with scala
mucking with scala
mucking with scala
mucking with sailfish
mucking with sailfish
mucking with sailfish
mucking with sailfish
mucking with sailfish
mucking with sailfish
removed tscc paths from submit_miso_pipeline
mucking with sailfish