Updated the area fraction to represent the fraction of total area on the cube which is a high-valence region.
Added error code to the HexMesher and the function write_obb_mesh.
Added function notes to the hexmaker.
Added more documentation to the hexmaker op. Altered the class so that the write_files function takes a base_filename rather than the class itself. Makes it easier change the base_filename if the user wants to.
Changed the name of the HexMaker function write_files to write_to_files (a little more descriptive).
Added two new files to separate the hexmaker class from the create_hv_mesh file.
Removed deprecated include.
Made the new Hexmaker class compile-able and added it as a dependency to the create_hv_mesh program.
Added object files to the make clean command.
Removed un-needed moab namespace qualifiers in hexmaker.
Removed deprecated (and sloppy) include for the OrientedBox class. This call now lives in hexmaker.
Separated almost all of the mk operations into a function for clarity in the code structure.
Added function for getting the volumes of the moab mesh after loading the hv file.
Added blank lines between comments and function declarations (this was causing compiling problems for some reason.)
Updated the way in which a base filename is passed to the write_obb_mesh function.
Added functions testing the hv mesh w/ random ray fires.
Removed deletion of the MK isntance (was causing problems compiling). Implemented the firing test in main.
Implemented a sweep over the prarmeters using the new random fire functions as well as the timing functions.
Removed all calls to get_time_mem and the function itself from create_hv_mesh.
Factored a function out of main that contains the full fire-test capability as test_hv_cube_mesh. This function will only require the area of the hv region, the valence of the verts in that region, and it will return the fire timing.