Changes for filetable/findfiles for the Options class. NOTE There is excess debug in here not separated out currently
Add space between {set number} and the hyphen (required for other things) plus excess debug that needs turned off before real commit
Changed lmwg.py to be more like amwg.py. HAS NOT BEEN TESTED YET
Updated to behave more like amwg when processing command line arguments for batch mode
modified prints (no new oens were added) and changed packages.amwg.plot_data to computations.plot_spec since files moved there in earlier Jeff commit