Revert "First cut at Mavenizing the project"

This reverts commit 5e72433bc401456e5d0e5c1668eb04985bc7a775.

Conflicts:
	.classpath
	src/shadow/parser/javacc/ShadowFileParser.java
	src/shadow/typecheck/BaseChecker.java
Revert "Trying to get things compiling"

This reverts commit ca69c30265ad9de4e811092d827d434c2b706d1b.

Conflicts:
	src/shadow/typecheck/BaseChecker.java
Moved files around for Maven
Added target to the ignore
Moved the test files to the standard location in Maven
- Also updated the build path settings in Eclipse
Changed TypeMismatchException to ShadowTypeMismatchException
- Created ShadowTypeMismatchException class
- Changed Apache digester package to digester3
Added maven stuff to Eclipse files
Updated/created log4j.xml file locations
Updated the test_linux_config file
- Removed a bogus test.pl file
Reverted connect method change because it was breaking things
Added shade plugin to pom.xml to build uber JARs
Added debug output
Updated ignore file