Fixed error in FilterFileFaker.  The faked files that it created were not readable by our own software.   Added a test to catch this.
Added additional documentation, remove unused file reference
Merge pull request #115 from broadinstitute/gg_fixBadFakedFilterFiles

Fixed error in FilterFileFaker.
picard version 1.126

picard version 1.126
Fixed Faked Filter files.  Need them to be of size one element for the faked filter file to have the same number of elements as other faked types.
Merge pull request #117 from broadinstitute/gg_fixFakedFilterFiles

Fixed Faked Filter files.  ...
Various aesthetic tweaks for HTML doc generation.
Merge pull request #119 from broadinstitute/mds_fix_metrics_html

Various aesthetic tweaks for HTML doc generation.
Fix style, initialize fileName to null and PicardException if no PU or ID in bam file
Merge remote-tracking branch 'upstream/master'