Merge branch 'rc1' of https://github.com/wasade/American-Gut into bloom_modifications
Remove filtering NB in favor of new merged module2
Fix typo
Reword "contaminant" as "bloom" in all code
Add testing files for full length filtering
Add full length sequences option
Re-correct import of lxml
Merge branch 'rc1' of https://github.com/wasade/American-Gut into bloom_modifications
Merge pull request #3 from adamrp/bloom_modifications

Bloom modifications