cleanup and ignore eclipse project files
initial impl. using arrays instead of linked lists, also upgraded compiler to gcc 4.8
fixed big in scanRight, fixed wrong type for idx, fixed removeOccurrence in doRepair
add removeOccurrence in repair.cpp
add check to removeOcc call in repair.cpp
Merge branch 'master' of github.com:yankrasny/Repair-Partitioning
Added clean rule to Makefile

repair.dSYM is something that will only happen on OSX
cleanup, just whatever
windows make clean
use example arrays to debug, we'll deal with stringToWordIds later
fix checks in doRepair (use 0 instead of -1)
add assertions to hash table entry
remove occurrence.h
found bug: consecutive equivalent occurrences, still trying to fix
account for neighbors that are the same pair
add input of one version of alice, add gdbinit in gitignore
fix edge case where consecutive pairs have same key, core algorithm now runs
Merge branch 'arrays'

Conflicts:
	Makefile