Fix broken variables tree iteration.

This fixes whole number of problems with iterating through RB tree
containing variables. Especially:
https://dev.cfengine.com/issues/6033
https://dev.cfengine.com/issues/6779

EvalContextVariableTableIteratorNew is calling VariableTableIteratorNew
which is not aware of variable indexes (VarRef->indices). Then while picking
value form tree to be iterator it might or might not contain indexes.
Randomly selecting variable with wrong index (and number of indexes)
is causing wrong behavior while iterating through list of variables.
VariableTableIteratorNext is checking indexes and returning variables
based on VariableTableIterator selected previously by
EvalContextVariableTableIteratorNew which is totally unreliable in case
of arrays.
These empty bundles are not needed anymore.