Wrote a wrapper for using prank's conversion function
Wrote a function for generating codon alignment and translated protein alignment from DNA sequences
fixed bug
fixed Booleans
Imported function syntax
Fixed Boolean again
Fixed variable name redundancy
prank -convert output filename
Added percent identity to BLAST wrapper output
Changed percent identity to number identity
Adjusted prank wrappers to print output to stdout
removed printing prank output
Wrote function for assessing whether one interval is within another interval