Added extra deps per Keiran's email
Added note about PCAP
Update README.md
More deps
Update README.md
Update README.md
Changes to how BRASS hangs together and documented now public repo for same.
Merge origin/multi_tumour into multi_tumour
Adding r-base-core install note, provides Rscript.
Update README.md
Missed one of the problematic paths for caveman tabix fix.
Merge branch 'multi_tumour' of https://github.com/ICGC-TCGA-PanCancer/SeqWare-CGP-SomaticCore into multi_tumour
Just putting in a note on this so I don't forget it going forward.

Will need to deal with this at workflow build time.
Some additional comments in the ini file, I believe there is a proper format for this which I will looking to while adding JDoc to the main code.
Merge branch 'multi_tumour' of https://github.com/ICGC-TCGA-PanCancer/SeqWare-CGP-SomaticCore into multi_tumour
Merge pull request #9 from ICGC-TCGA-PanCancer/multi_tumour

Multi tumour - working