TaxonomicConverter untested
TaxonomicConverter done, fully working with greengenes database
Task reduction implemented and started to implement hmptree conversion
toHMPTree works for a single tuit-formatted file
mergeDatasets implemented
TreeFormatter updated
Conversion of hit id made simpler
Mothur format added, finally toHMPTreeFormat works properly
Cutoff tested for mothur
latest
A full procedure of parsing, enriching with species and creating a RAM-based database was implemented and partially tested
Sequence format corrected for -parse_seqids option in makeblastdb
GreenGenes working prototype
conflicts resolved