Changed route to heme report
added empty heme report file
Added serialized db lookup auto create when missing, added heme report jsp, changed regex for db to get mass and change DAO terms
Merge branch 'master' of https://github.com/romanzenka/swift

Conflicts:
	services/heme/src/main/java/edu/mayo/mprc/heme/HemeUi.java
	services/heme/src/test/java/edu/mayo/mprc/heme/dao/HemeUiTest.java

Also REMOVED HemeReportEntry....added Peptides as list to ProteinEntity (formerly ProteinId). Moved selection criterial to processrow, sort and filter as scaffold file is read.
Heme path submission, where peptides are checked for mutation & then target size for selection.
Semi-commit, still an issue with correct db seq in ui display.
Fixed variant viewing modal, displays correct seq & highlight
Fixed tables and moved jsp methods to helper.
Merge pull request #27 from raymond301/master

Revamp of HemePath
Working on QuaMeter identified spectra counter.
Merge branch 'master' of github.com:romanzenka/swift
Using the pre-configured fasta database cache folder.
Removing the stub for local testing.
Fixing a bug where 3x scoring was showing up as HMA.

BugzId: 3564
Merge branch 'atlas_dev'
When DbCurator fails, report line number in fasta file
BugzId: 3566
Better error message
BugzId: 3566
Fixing caching log reporting bugs.
Fixing the caching test.
The logOutputFolder is not saved when its value is equal to default ("")
Removed obsolete taskId parameters from work packets.