Initial commit
Initial commit. Program headers seem fine and Section headers work for the most part.
Removed old files.
Added doxygen configuration.
Made comments doxygen compatible.
Moved files to src. Added CMakeFiles.
Cleaned up output. Added PH flag support.
Stop tracking CMakeLists.txt.user

This file is user specific, it shouldn't be in the repo.
Add target file parameter. Use -pedantic -Wall
Cleaned up formatting.
Added section header name support.
Added fopen check so we don't open NULL file descriptors.
OS/ABI support.