Adds/changes some var names, takes establishing scale out for now
Enclosed some stuff in functions, still working
Adds implementation of createArcs() for updating partial entang

- Still seems to be working
Implements removeArcs(groupG) for partial entangs, still works
Implements addArcs() for partial entang, still seems to be working

- The way it goes about doing colors won't indicate which is first
anymore, but for the final thing it will probably be good. Later
might need to figure out how to get those colors back for testing