Changed Albany performance tests to be baselined against my new machine

Performance tests have machine-dependent timings to test against.
LCM: Debug output enclosed in #ifdef's statements.
LCM: Minor cosmetic changes.
LCM: Fixed BC error accidentaly introduced in recent changes.
Rebaseline perf tests for my new machine.
refactored Albany_Application in order to allow some flexibility when mesh is provided by an external application.

Added flag createAlbanyApp in Albany_SolverFactory functions. When createAlbanyApp==false, the albanyApp is not created but used. When createAlbanyApp==false, the app is created (default behavior).
modified MPAS and CISM interfaces to comply with recent changes (refactoring of Albany Applications, and parameters fields being handled by StateManager).
bug fix: too many arguments in call createModel. (I just introduced this bug).
Created a defined interface between the optimization kernel and the solver.
Merge branch 'master' of github.com:gahansen/Albany
LCM: Relaxed tolerance for locating nodes in one block inside elements
of another block.
Merge branch 'master' of github.com:gahansen/Albany
FELIX: modified interface with mpas.
       Now it needs to be enabled with config option "ENABLE_MPAS_INTERFACE"
Merge branch 'master' of github.com:gahansen/Albany
FELIX: fix configuration when installing mpasInterface lib
Do not initialize states in state manager if they have been already initalized.
Fixing incorrect syntax: replacing & with &&.
Add test dependecy: test FO_GIS_GisRestartUnstructured needs to be run after test FO_GIS_GisUnstructured
Merge branch 'master' of github.com:gahansen/Albany
Update nemesis file for restarts.

The other failing test to do with FELIX Restarts is being
addressed.