Cleaned currently unused code to get 100% coverage in this branch
Cleaned currently unused (but useful) code to get 100% coverage in this branch
Used os.path functions and string formatting for more robust filename handling
Cleaned up csv writing code
Switched to logging module for output rather than print statements
Pulled specific changes from clean branch
Added case names to file outputs
Removed clone code in rank calculation
Removed clone code for building cases
Remove graph building clone code
No more clonedigger clones remain now
Small typo corrections
Added method to calculate maximum partial correlation by varying time delay
Added .csv to .gitignore
Removed index limitations used during development
Merge branch 'clean' into transientranking

Conflicts:
	looptest.py
	ranking/gaincalc.py
Added methods to plot transient importance
Modified file reading location to occur only once
Implemented fixed length in time series data vectors
Normalized data
Added threshold tests