AE: Doxygen'd PulseCandidateFinder_InvestigateParameters
AE: Update comments in PlotPedestalAndNoise.h
AE: Doxygen'd PulseCandidateFinder.h
AE: Doxygen'd TemplateArchive
AE: Added doxygen comments to finished classes. Merge branch 'feature/AE_be-more-doxygen' into develop