WINDUP-345: Make the commitPeriodically from IndexClassFilesRuleProvider a normal operation
WINDUP-338: org.jboss.windup.rules.apps.xml.legacy.EjbConfig uses and  which limits the operations too much
Merge pull request #331 from jsight/WINDUP-345

WINDUP-345: Make the commitPeriodically from IndexClassFilesRuleProvider...
Add another sample servlet
Added the ability to start a JavaClass from an already existing variable, and also made the DiscoverJavaFilesRuleProvider set the original source field.
WINDUP-345: Make the commitPeriodically from IndexClassFilesRuleProvider a normal operation
WINDUP-356: Javadoc polishing - remove Frames packages, add some package-level javadoc with links to GitHub
Merge branch 'master' of github.com:windup/windup into OndraZizka-Javadoc-WINDUP-356
Merge pull request #334 from lincolnthree/OndraZizka-Javadoc-WINDUP-356

Ondra zizka javadoc windup 356
Merge pull request #333 from mbriskar/WINDUP-338

WINDUP-338: org.jboss.windup.rules.apps.xml.legacy.EjbConfig uses and  w...
WINDUP-369: Be able to focus effort on specific jars in the ear or war