Merge pull request #1 from kyledef/master

Included MYSQL installation for now
Updated
updated
Fixed mysql in Dockerifle
Added sed command to update apache config
Added sed command to update apache config
Added sed command to update apache config
Added sed command to update apache config
Modified regex to keep indentation in apache configuration
Added sed commands to replace entries in database.php.
Added script to change mysql password for root user.
Added sed commands to modify configuration file to set the secret needed for sessions. Lazy fix for permission error: chmod'd 777 entire pyro directory, recursively