Fix help message for issue comment argument
Fix issue/pull request help messages

The variable used to change the name of the object being described was
completely wrong, because it was a class object so it never varied. When
possible, now `cls` is used instead, and when is not the object name is
just specified manually.

A few help typos are also fixed.
Add git_dir() function to get the .git directory
pull rebase: Add --stash-(include-untracked|all) options

To address #22 in a simple way, the new options --stash-all and
--stash-include-untracked were added to the pull rebase command, which
translate directly into --all and --include-untracked when invoking the
git stash command.

Previously --all was always used, and caused a lot of trouble with
repositories storing big data files that were outside git control. Now
the default is changed to do a plain git stash, at the expense of
slightly bigger probabilities of getting some conflict in the checkout
of the pull request when rebasing. So to keep using the safe option, now
is necessary to pass --stash-all explicitly.