Merge pull request #29 from wtsi-npg/master

Bring up to date with release 1.2.0
Support for Fluidigm genotyping platform
Use Set::Scalar for more informative error messages on SNP sets
Merge branch 'devel' into fluidigm
Added is_control and compact_call methods.
Added filter_on_confidence method
Improved log message
Merge remote-tracking branch 'wtsi-npg/devel' into fluidigm
Discard empty directories names from File::Spec::splitdir
Corrected the default reference name
Tighten Windows->Linux path mapping regexp
Tighten Windows->Linux path mapping regexp
Merge pull request #209 from keithj/devel

Tighten Windows->Linux path mapping regexp
Added filter_on_confidence method to AssayResultSet

Added is_control method to AssayResult
Corrected the reference name
Added WTSI::NPG::Genotyping::Fluidigm::Subscriber
Added is_call method to WTSI::NPG::Genotyping::Fluidigm::AssayResult

Added further tests for Fluidigm
Logging bug hotfix
Merge branch 'release-1.2.2' of github.com:wtsi-npg/genotyping into release-1.2.2
Merge branch 'release-1.2.2' into devel