classpath for v5
Bump jsonld-java to 0.5.0 release
eclipse classpath for version 3, 4
added saveOntology() methods to OWLMutableOntology
Declaration of save methods should be on OWLOntology itself
OBO 1.2 ontologies cannot be parsed by the 1.4 parser. Added 1.2 parser
from OWLAPITOOLS to compatibility package.
added explicit dependencies for sesame on distribution pom

Lacking these dependencies caused projects importing owlapi-distribution
through a maven dependency to fail
readded getValue as deprecated
readded OWLOntologyFormat as deprecated interface implemented by
compatibility formats
enabled OWLOntologyManager to build and keep a loader configuration
moved missing imports and header enumerations back where they were in
3.4.10
add a few more classes to compatibility package
added missing EntitySearcher methods for negative property assertions
added HasAnnotationPropertiesInSignature to uniform treatment of
annotation properties
fix #253 StructuralReasoner.getSameIndividuals does not behave as
advertised

getDifferentIndividuals was not implemented as well.
added missing getDomains(OWLDataProperty, Iterable<OWLOntology>)
A few more methods added to helpers and Manchester parser
fix #255 PrefixOWLOntologyFormat is missing from the compatibility
module

Fixed as previously for OWLOntologyFormat, added an interface with the
same name as the class and made the compatibilty formats implement it.
The interface extends PrefixManager so should cover most of the use
cases for PrefixOWLOntologyFormat
removed null check on ontology walker, as in some situations a null
current axiom is correct
fix #260 and fix #261 data and object cardinality are quantified
restricitons