Added cmake files.

Pixie_scan can now be compiled with cmake. Not all options were ported.
Some dependencies may be missing.
Added documenation for cmake.
Updated Doxyfile.
Added ROOT support to cmake.

Added the FindROOT module to get relevent root libraries and locations. Added such that if USE_ROOT is set to off ROOT is not added.
Corrected REVF flag output.
Added source files VandleProcessorROOT.cpp/hpp
Merge branch 'master' of https://github.com/ksmith0/PixieDust
Corrected cmake to link ROOT libraries.
Merge branch 'master' of https://github.com/ksmith0/PixieDust
Corrected cmake file.

Loaded ReadBUffData twice. Did not incorporate ROOT libraries.
Corrected the USEROOT flag.

Corrected cmake file which incorrectly added a mispelled definition flag.
Shifting the TOF spectra to bring the full range into view
Commenting some unnecessary processors in the Makefile and DetectorDriver
Setting things to only use a single start.
Add ignore statements for damm files.
Merge branch 'master' into ksmith
Added cmake options.

Support for pulsefit option.
Updated status message sfor install location.
Now checking for local hhirf upak files prior to typical search.
Corrected issues with pulsefit option.

Added another dependency.
Added U of M liquid scintillator analysis.

Added PulseAnalysis from Mike Febbraro to LiquidProcessor to handle
analysis of U of M detectors. The code currently dumps traces to an
ascii file so that Mike can post process them.
Corrected issues with pulsefit option.

Added another dependency.