Refactor deploy and init_files.

* Move from deploy_init_to to service.deploy scripts and a deploy_to.
* Move init_files/30 to init_files/v1. Add v2 which has legacy
* Eucalyptus functionality removed.
* Some PEP8 Compliance.

	renamed:    init_files/30/AtmoCL.jar -> init_files/v1/AtmoCL.jar
	renamed:    init_files/30/VNC-Server-5.0.4-Linux-x64.deb -> init_files/v1/VNC-Server-5.0.4-Linux-x64.deb
	renamed:    init_files/30/VNC-Server-5.0.4-Linux-x64.rpm -> init_files/v1/VNC-Server-5.0.4-Linux-x64.rpm
	renamed:    init_files/30/atmo-initer.rb -> init_files/v1/atmo-initer.rb
	renamed:    init_files/30/atmo_init_full.py -> init_files/v1/atmo_init_full.py
	renamed:    init_files/30/atmocl -> init_files/v1/atmocl
	renamed:    init_files/30/mount_volume -> init_files/v1/mount_volume
	renamed:    init_files/30/nrpe-snmp-install.sh -> init_files/v1/nrpe-snmp-install.sh
	renamed:    init_files/30/shellinaboxd-install.sh -> init_files/v1/shellinaboxd-install.sh
	renamed:    init_files/30/vnc-config.sh -> init_files/v1/vnc-config.sh
	new file:   init_files/v2/VNC-Server-5.0.4-Linux-x64.deb
	new file:   init_files/v2/VNC-Server-5.0.4-Linux-x64.rpm
	new file:   init_files/v2/atmo_init_full.py
	new file:   init_files/v2/nrpe-snmp-install.sh
	new file:   init_files/v2/shellinaboxd-install.sh
	new file:   init_files/v2/vnc-config.sh
	modified:   requirements.txt
	modified:   service/deploy.py
	modified:   service/instance.py
	modified:   service/tasks/driver.py
Merge branch 'master' of github.com:iPlantCollaborativeOpenSource/atmosphere