Direct Deploy to Salesforce failing for ToolingAPITest.cls

On direct deployment/installation to salesforce, receiving one of error.ToolingAPITest.cls deployment is failing, rest all components get succesfully deployed. Please refer below log.  This is more of installation issue and not really code issue, didn't knew where to post, so posting here.

Deployment Started
Status: Queued 
Status: InProgress 
....
Status: Completed 
Deployment Complete
Failures:
classes/ToolingAPITest.cls(ToolingAPITest):Not in package.xml
Merge pull request #21 from chiragmehta84/patch-1

Direct Deploy to Salesforce failing for ToolingAPITest.cls