to get nodes as genesymbol, not UniProtKB
drugbank parser and results for genesymbol added
targets only for human were extracted
orf map information for orfs appearing in either top200 or botto200 regulated genes in cMap
orfmap file cleared (|->;, squeezed)
skipped PPIs (outdated transcripts) added
PPI with maximum distance limits are added
pubchem API for inchikey retrieval added
get inchikeys for drugs in drugbank script corrected
drugbank drugname list added
one cid gives one InChIKey
drugbank InChIKeys added
InChIKey and GeneSymbol conversion (with minimum score set) for STITCH file added
drug-inchikey map for cmap added *manually searched through ChemBank, Sigma-Aldrich, Cayman Chemical.. etc
drugname_inchikeys.pl converts drug list to inchikeys; using pubchem, prestwick, chembank (manually found) for complex mixture of different ID types
drug-inchikey list for cmap added
^M characters removed
corrected PUGREST search for drug names with underscores
removed cmap inchikey list before underscore correction
removed _HUMAN suffix for drugbank targets & moved into drugbank folder