Filters now takes a list, not a path object
Combined output works with new names
Remove print statements
Combined scripts now work with new name
remove annoying warning output
xlsmaker Analysis now uses new sample names
fix cnv tab renaming
filters now work with new names
xls maker deals with new files names
test filters works with new names
remove old test files
remove unused functions
one test still failing, need to create test data
old filters work on new samples
combined_cnv works with new names
combined_output works with new names
combined_pindel works with new names
msi filename fix
add requirements
add demux