Cleaning up examples
Cleaning up examples
Merge branch 'devel' of github.com:/dmorse/simpatico into devel

Conflicts:
	examples/diblock/N8/mc/param
Cleaning up examples
Cleaning examples
Cleaning up worm and dihedral tests
Fixing boundary condtions in Span Hoomd(Reader/Writer)
Fixing SpAn HoomdWriter format and cleaning examples
Cleaning up examples
Cleaning up examples
Adding "clean" scripts to examples
Draft of SpAn::LammpsDumpWriter
Change HoomdConfigWriter float format and example
Editing TODO files
Commiting changes to FileMaster, and consequences.
Changing command line to use -p and -c options.
Merge branch 'devel' of github.com:/dmorse/simpatico into devel
Small corrections to user manual.
Adding -p & -c options to mdPp.
Fixing bug in Processor.cpp, cleaning examples