Fix win64 warnings

- Switch most unsigned int -> size_t
- Switch some int -> ptrdiff_t
- Update stack "new" operators in math unit tests to have sufficient
space to fix alignment.
Fix printf warnings

- Use length specifier "z" for size_t type and "t" for ptrdiff_t.
Fix signed/unsigned comparisons

- Comparisons between size_t/ptrdiff_t require special handling.  The
size_t is strictly larger than ptrdiff_t, so if ptrdiff_t > 0, then we
can safely convert it to size_t.
Modify size_t to double casting

- For consistency, cast the result of the arithmetic, rather than cast
the size_t first.
Removed remaining unsigned int

- Per request, removed all unsigned int except where it is required.
Update printf formatting

- MSVC does not yet implement z and t sizes.
- Modify new-style code to use std::cout.
- Preserved fprintf for old-style code, and casted size_t/ptrdiff_t
variables to 64-bit.
Update remaining getSize functions to return size_t

- Negative values are clipped to 0.
Win64 conversion, various changes from review

- Mark MlcpGaussSeidelSolver as TODO.
- Revert transient modification to OdeState::getVelocity.
- Provide note on why we're increasing the stack size buffer when using
new on Eigen types.
Fix printf warnings

- GCC wants to see "long long".
Merge branch 'fix/win64-warnings' into 'master'

Fix win64 warnings

Merged-on: https://www.assembla.com/code/OpenSurgSim/git/merge_requests/910043