updated Miso to work with latest submit_miso_pipeline.py
Merge pull request #5 from mlovci/master

added ce10 genic regions location to TsccUtils, fixed mm9 typo
Merge pull request #3 from olgabot/master

updated Miso to work with latest submit_miso_pipeline.py
updated clip analysis to work with latest version, changed mouse annitations and change wall times
fixed whitespace bug in parse oldsplcie builder that cauused it to fail
updated clip classic to have output file
fixed bedToBigBed to work with narrow peaks
Merge branch 'master' of https://github.com/mlovci/gatk
Merge branch 'master' of https://github.com/mlovci/gatk
Merge branch 'master' of https://github.com/mlovci/gatk
Merge branch 'master' of https://github.com/mlovci/gatk
fixed conflict in miso file