Updated 5GPM pipeline: 1. Updated in-house_parameters_5gpm.csv for new BED file and derived interval files. 2. Updated 3 protocols to use the standard Targets + 20bp flanking sequence BED file instead of an additional one with 100 bp flanking sequence. 3. Removed comment lines with SVN keywords from all protocols as we switched to Git.
Updated 5GPM pipeline for GCC cluster: 1. Updated in-house_parameters_gcc.csv for new BED file and derived interval files. 2. Updated 3 protocols to use the standard Targets + 20bp flanking sequence BED file instead of an additional one with 100 bp flanking sequence. 3. Removed comment lines with SVN keywords from all protocols as we switched to Git.
Merge pull request #131 from pneerincx/master

Updated 5GPM pipeline