genomics: remove calls to core_memory_pool_examine

Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
genomics: remove calls to thorium_actor_print

Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
thorium_actor: add thorium_actor_get_memory_pool

Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
thorium: use thorium_actor_get_memory_pool

Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
thorium: add thorium_actor_get_ephemeral_memory_pool

Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
thorium: simplify thorium_actor_get_persistent_memory_pool

Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
thorium: fix header macro (coding style)

Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
thorium_actor: add support for enabling / disabling log levels

Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
unitig_visitor: use thorium_actor_log

Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
biosal_assembly_graph_store: use thorium_actor_log

Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
spate: make sure that spate is deterministic

[boisvert@bigmem biosal]$ grep '>' output1/unitigs.fasta |sort|uniq > signature1
[boisvert@bigmem biosal]$ grep '>' output2/unitigs.fasta |sort|uniq > signature2

[boisvert@bigmem biosal]$ wc -l signature*
   853 signature1
   853 signature2
  1706 total

[boisvert@bigmem biosal]$ ls -l signature*
-rw-rw-r--. 1 boisvert boisvert 64781 Dec  9 21:20 signature1
-rw-rw-r--. 1 boisvert boisvert 64781 Dec  9 21:22 signature2

[boisvert@bigmem biosal]$ sha1sum signature*
1b12ba2739e9cd1734304014d0cc11e6a1992a1f  signature1
1b12ba2739e9cd1734304014d0cc11e6a1992a1f  signature2

Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>