Update file provenance report parsing and PDE representation from seqware 1.0.14 to 1.0.17+
- new attributes: 
Root Sample Name
Root Sample SWID
Parent Sample Organism IDs
Sample Organism ID
Sample Organism Code
Sequencer Run Platform ID
Sequencer Run Platform Name
- parent samples are now represented as objects (rather than lists or maps encoded as strings)
Merge branch 'develop' into PDE-743

Conflicts:
	common-utilities/pom.xml
Merge branch 'PDE-743' into develop