git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11672 f3b2605a-c512-4ea7-a41b-209d697bcdaa
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11673 f3b2605a-c512-4ea7-a41b-209d697bcdaa
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11676 f3b2605a-c512-4ea7-a41b-209d697bcdaa
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11677 f3b2605a-c512-4ea7-a41b-209d697bcdaa
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11678 f3b2605a-c512-4ea7-a41b-209d697bcdaa
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11679 f3b2605a-c512-4ea7-a41b-209d697bcdaa
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11680 f3b2605a-c512-4ea7-a41b-209d697bcdaa
fix bugs introduced when maxtouch was made dynamic

when maxtouch was made dynamic, some optimizations were also
added to the neighborlist build which could result in empty
neighborlists and limited the number of neighbors in those lists.
This collided with some of the heuristics used when threading
the shear history fix. these are now handled. No more segfaults
and multi-threaded trajectories diverge only slowly from the regular.
Merge remote branch 'lammps-ro/master' into lammps-icms

Resolved Conflicts:
	doc/Manual.html
	doc/Manual.txt
	src/finish.cpp
fully re-instate pre-kokkos patch logic
solve the problem with multiple created bonds for newton_bond off

bonds were
update comment
import simpler solution for the bond/create issue from steve
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11682 f3b2605a-c512-4ea7-a41b-209d697bcdaa
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11683 f3b2605a-c512-4ea7-a41b-209d697bcdaa
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11684 f3b2605a-c512-4ea7-a41b-209d697bcdaa
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11685 f3b2605a-c512-4ea7-a41b-209d697bcdaa
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11686 f3b2605a-c512-4ea7-a41b-209d697bcdaa
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11687 f3b2605a-c512-4ea7-a41b-209d697bcdaa
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11688 f3b2605a-c512-4ea7-a41b-209d697bcdaa