Sphinx doc work

External API Link generation work(.. include) for PySide.
wxPhoenix link substitutions is done, but still on hold.
Some general cleanup to get the sphinx Warnings to zero. Yea :)

Also Move dir startup Fix for wxPython GUI

Doc Generator should be able to see everything now and output all html.
Ready for further working by documentarists or coders "docstringing" as
they go.