Edited awe wrapper script to accept file type as parameter.
Merge pull request #332 from teharrison/master

merge of develop code
Merge pull request #333 from teharrison/master

remove test status
Merge pull request #334 from teharrison/master

new script for resubmitting existing job
Merge branch 'master' of github.com:MG-RAST/pipeline
Merge pull request #335 from teharrison/master

template for docker pipeline
added docker images and BASH_ENV
Merge pull request #336 from wgerlach/master

added docker images and BASH_ENV
Merge pull request #337 from teharrison/master

update resubmit to remove old awe job
Merge pull request #338 from teharrison/master

update resubmit to remove old awe job
Merge pull request #339 from teharrison/master

fix file pathing
Merge pull request #340 from teharrison/master

minor bug fixes
Merge branch 'master' of github.com:MG-RAST/pipeline
Added M5NR and M5RNA to expanded_sims2overview script.  These were being omitted from the analyses.
Merge pull request #341 from jaredbischof/master

Fix to expanded_sims2overview so M5NR and M5RNA summaries are being computed again.
Debugged error in summary script.
Merge pull request #342 from jaredbischof/master

Debugged error in summary script.
fix drisee summary stats