Pindel

minor style remark (I'm willing to drop the "1 per line" thing, but you should use separate lines for the entries):

```python
files_to_copy = [
    (['pindel', 'sam2pindel', 'pindel2vcf', 'bam2pindel.pl', 'Adaptor.pm'], 'bin'),
   "demo", "gmt", "gmt-web", "test", "README.md", "RELEASE",
]
```