Initial commit
added boost and tclap headers.
added htslib header and source files and make file
added base header and source files.
added compute_concordance
updated licensing
added boost/algorithm/string/config.hpp
added boost/config.hpp
modified makefile to automatically compile htslib archive file
miscellaneous modifications
added boost config folder
added boost/detail
removed boost
additional removal of boost dependencies
updated for master path
made make file work for mac too
1
corrected an error in bgzf.c
modified make file
convert time.h to ctime
updated to htslib dev version with a more complete API.  Many changes across all source files.