Map Changes

This PR mostly consists of map changes and few fixes/optimisations.

Atmospherics changed to be slightly larger, main aim of this PR is to allow people to install optimisations without being highly limited by small amount of space. Many of the unused things have been removed. Current layout is the "basic" stuff you need for normal operations, which can be easily upgraded to fit everyone's needs.
http://i.imgur.com/boKkEvQ.png

Engine room was once again changed a bit to remove some unused stuff and simplify the piping. Pipes are no longer placed under the wire (yellow pipe under yellow wires?..). Omnifilters are now properly connected and used. It is <b>significantly</b> easier to do phoron cooling now, as filters are in position which should suffice for any coolant type, just change the configuration. Once again, it is very easy to modify to suit anyone's liking.
http://i.imgur.com/AGGG8iy.png

Specific info in commit descriptions