Merge branch 'master' into local-hedgehog

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/rpx@88118 bc3139a8-67e5-0310-9ffc-ced21a209358
Merge branch 'master' into local-hedgehog

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/rpx@88119 bc3139a8-67e5-0310-9ffc-ced21a209358
fix leftover issues from renaming package


git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/rpx@88162 bc3139a8-67e5-0310-9ffc-ced21a209358
In pxref, dealing with cases without any or pending publications

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/rpx@88244 bc3139a8-67e5-0310-9ffc-ced21a209358
First version bump prior to creating 2.14 branch.


git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/rpx@88838 bc3139a8-67e5-0310-9ffc-ced21a209358
Second version bump after creating 2.14 release branch.


git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/rpx@88840 bc3139a8-67e5-0310-9ffc-ced21a209358
Due to a change in R, packages that use BiocStyle vignettes and the knitr 
vignette engine must explicitly Suggest knitr.


git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/rpx@91414 bc3139a8-67e5-0310-9ffc-ced21a209358
update to latest official version