Merge branch 'kbase'
Merge branch 'kbase'
Merge branch 'kbase'
add upgrade option for pip install
Merge branch 'ff'
add prettytable dependency for server
add legacy Perl getopt.pl for SSPACE
Merge pull request #263 from kbase/dev

fix default shock host
Merge branch 'master' into ff
Merge branch 'master' into ff
support non-local mongo server
add default values to mongo collections
add utils for better URL conversion
support remote mongodb server
add auth option for shock post_file functions (w/ & w/o curl)
add auth for shock passed as direct_url
fix downloaded filename
merge hotfix
add mongodb port
remove shock_get dependency
fix auth support for shock upload
client error handling
wrap upload routines
check if shock needs auth