Install ansible and elasticluster associated files; removes hardcooded paths. Create keypairs and automatically populate elasticluster config. Update documentation to match streamlined process
Additional work finalizing AWS and bcbio infrastructure: finish documentation, integrate with elasticluster main function, provide commands to clean up resources
Move default bcbio elasticluster configuration to non-ec specific dotfile to avoid stomping on elasticluster outside of bcbio. Provide options to point to different configuration files when running bcbio. Thanks to @kern3020
Enable specification of input YAML files from an S3 bucket, automatically setting upload details. Fix issues with directory identification for mounting on pre-run systems
Enable specification of input YAML files from an S3 bucket, automatically setting upload details. Fix issues with directory identification for mounting on pre-run systems
Create batch scripts for submission to cluster schedulers. Removes copy/pasting for runs on AWS