Initial check-in.
Initial check-in.
Fixed a fastq format bug.
Fixed a fastq format bug.
Fixed a fastq format bug.
Fixed a fastq format bug.  Removed some old commented code.  Added a -b option to trim sequence lengths.
Fixed a fastq format bug.
Fixed a fastq format bug.
Added a little explanation of auto-trim mode.
Updated copyright info.
Updated for new files.