Work in progress
Added new example
simple_diffusion example as class, meshextend is now an instance method in model, cleaned up assemble method
urdme does not write degug input files as default.
Fixed issue #7, urdme_solver_data is no longer part of the model class
work in progress
Cleaned up mesh class, now simply extends dolfin.Mesh, dropped simple Cartesian mesh support
Removed initial condition from species class, updated placeNear with a first proposal for a format to specify initial conditions.
work in progress on simple subdomains
First go at handlig multiple subdomains
Changed inital placement of B
bug fix to see error
Merge pull request #9 from briandrawert/refactor

bug fix to see error
work in progress
work in progress, identified an issue with the files produced by dolfin-convert
cleanup of the solver execution interface
Merge pull request #10 from briandrawert/refactor

cleanup of the solver execution interface
The exec interface now creates Dolfin functions for each species and timepoint upon loading the core solver output file
code cleanup
Merge pull request #11 from briandrawert/refactor

code cleanup