Add Permissions to manifest (required for webstart)

Also added Codebase (currently * allows running from anaywhere) and Application-Name (displayed in the webstart dialog, instead of the user-unfriendly classname)

Conflicts:
	components/insight/build/dist.xml
Add Trusted-Only:true to the Insight manifest.

See http://docs.oracle.com/javase/6/docs/technotes/guides/jweb/mixed_code.html#trusted_only
Don't sign the webstart jars by default.

We're going to be code-signing in a separate process, so this prevents jars being double-signed, once with the self-signed cert and once with a proper one.

The webstart-sign target is still there, so you can use `./build.py webstart-sign release-webstart`.
Add an external webstart signing script

Automatically run this script with the existing self-signed certificate as part of the standard docs/hudson/OMERO.sh build
cd target/ before doing the code-signing

This is so that ./build.py clean will remove any logs or temporary directories
Disable jar-signing in update-version target

Conflicts:
	build.xml
Simple well field selection on full viewer
Use system proxy environment variables
Add verbose option (prints out full jarsigner command)
Check jarsigner is executable
Log proxy args and directory to be zipped. Warn about password logging.
Allow jarsigner without args to return 0 or 1

Return code depends on Java version
Change check_jarsigner error message (since exit 0|1 is allowed)

Just in case any pedants are reading
Update dev_4_4 submodules

Repository: openmicroscopy/openmicroscopy
Already up-to-date.

Repository: openmicroscopy/bioformats
Updating d853f51..741162c
Merged PRs (fast-forward):
  # PR 1046 sbesson 'Update version numbers to 4.4.11'
  # PR 1051 sbesson ' Add placeholder for 4.4.11 version'
  # PR 1044 hflynn 'Remove mention of BF 4 update site for Fiji'
  # PR 1039 hflynn 'Fix link to bitplane release notes (rebased onto dev_4_4)'
  # PR 1020 hflynn '4.4.11 docs fixes'
  # PR 907 ctrueden 'Tell Eclipse to ignore gmaven-plugin configuration'
  # PR 930 hflynn 'Using correct redirect for 4 download page'
  # PR 936 hflynn 'Fixing IDL links'
  # PR 879 hflynn 'Updating TILL Photonics website link (rebased onto dev_4_4)'

Repository: ome/scripts
Updating bef5c0c..6816f59
Merged PRs (fast-forward):
  # PR 67 cneves 'Allow passing extra channel rendering options to Make_Movie script (see ...'
  # PR 74 sbesson 'Fix scripts to comply with PEP8 1.5.0 (rebased onto dev_4_4)'
  # PR 65 sbesson 'Drop --use-mirrors from .travis.yml (rebased onto dev_4_4)'

Repository: openmicroscopy/ome-documentation
Updating ef59469..21d2437
Merged PRs (fast-forward):
  # PR 732 hflynn 'Remove webstart limitation 4.4.11'
  # PR 668 hflynn 'Always link to latest 4 download page'
  # PR 662 hflynn 'Making 4.4 status as maintenance version clear'
  # PR 648 sbesson 'Drop --use-mirrors from .travis.yml (rebased onto dev_4_4)'
  # PR 641 hflynn 'Updating 4.4.x Demo server unavailable now'
  # PR 635 sbesson 'Document latest changes to the Homebrew OMERO formula'
  # PR 631 hflynn 'Changing Windows Ice download link to 3.4'

Generated by OMERO-4.4-latest-submods#275 (http://ci.openmicroscopy.org/job/OMERO-4.4-latest-submods/275/)
Merge pull request #2275 from cneves/feature/fullviewer_field_selector

Simple well field selection on full viewer
Merge pull request #2238 from manics/webstart_codesigning-dev_4_4

Webstart code-signing 4.4. Merging for release of 4.4.11.
Merge pull request #2299 from snoopycrimecop/merge/dev_4_4/submodules

Update dev_4_4 submodules. Merging for inclusion in 4.4.11.