WIP: Phase1-refactored runs, but DataSinks failing
WIP: Cleaned up singleSubject and converted phase1.py to a wrapper of Autoworkup.py
BUG: Configuration dictionary passes execution and logging values to nipype.config object
Merge branch 'refactorPipeline' of github.com:BRAINSia/BRAINSTools into refactorPipeline

Conflicts:
	AutoWorkup/workflows/phase1_singleSession.py
	AutoWorkup/workflows/singleSubject.py