Improve edge acceleration for MB-3.  Fix edge acceleration for MB-2.  Other minor changes.

--Add simple edge acceleraiton methods.  The non-linear one works.  The linear one doesn't really work.
--Change convergence criterion so that 1-c correction isn't used if we are accelerating.
--checkNegativeFlux() in SourceIteration.cpp now has the option to check for neg. fluxes in edgePhi0.
--Add print option to checkNegativeFlux() and checkNegativeAngularFlux()
--Fixed MB2 edge acceleration.  (Forgot to reset region counters.)
--Add sigma_{t,j+1/2} vector.
Fix boundary conditions for diffusionSolve()