Committer: tahia <tahiadu@gmail.com>
	new file:   bin/01-demultiplex/Dmltplx.sh
	new file:   bin/01-demultiplex/make-dmltplx-param.sh
	new file:   bin/02-concat/Concat.sh
	new file:   bin/03-filter-reads/._Filter.sh
	new file:   bin/03-filter-reads/._make-filter-param.sh
	new file:   bin/03-filter-reads/Filter.sh
	new file:   bin/03-filter-reads/make-filter-param.sh
	new file:   bin/04-mapping/BwaMemMap.sh
	new file:   bin/04-mapping/make-map-param.sh
	new file:   bin/05-samtools-MapFilter/FilterMap_samtools.sh
	new file:   bin/05-samtools-MapFilter/make-filtermap_samtools.sh
	new file:   bin/06-picard-sort/._make-sort.sh
	new file:   bin/06-picard-sort/PicardSort.sh
	new file:   bin/06-picard-sort/make-sort.sh
	new file:   bin/07-picard-add-read-groups/PicardAddGrp.sh
	new file:   bin/07-picard-add-read-groups/make-add-rg.sh
	new file:   bin/08-samtools-rmdup/Rmdup_samtools.sh
	new file:   bin/08-samtools-rmdup/make-rmdup_samtools.sh
	new file:   bin/09-picard-merge/BamIndex.sh
	new file:   bin/09-picard-merge/PicardMerge.sh
	new file:   bin/09-picard-merge/make-picard-merge.sh
	new file:   bin/10-freebayes/JoinFreebayes.sh
	new file:   bin/10-freebayes/ReadMe.txt
	new file:   bin/10-freebayes/RunFreebayes.sh
	new file:   bin/10-freebayes/make-freebayes.sh
	new file:   bin/10-freebayes/vcf_to_joinmap_v3.pl