Changed drupalgap_onload() to to add drupalgap to Drupal.modules and placed it towards the top of the file. Prevented drupalgap_bootsrap() from being called until the includes directory is migrated to jDrupal. Removed the call to drupalgap_settings_load from drupalgap_bootstrap() since jDrupal takes care of this now. Removed drupalgap_includes load from drupalgap_bootstrap() since jDrupal will eventually house all of this code. Changed drupalgap_deviceready() to be jQuery-less, JS only, and prevented it from calling drupalgap_goto() until jDrupal stuff is sorted out. Deprecated drupalgap_module_load(). Added drupalgap_services_request_postprocess_alter(), but it is incomplete at this point, we need to get core modules and includes all into jDrupal, and have a DrupalGap build process as well. No more dynamically including core functionality, only stuff in the app directory, but even that will be taken care of by jDrupal. Deprecated drupalgap_settings_load().
Changed drupalgap_service_resource_extract_results() to only work on system connect, since we won't be doing any resource bundling on anything except system connect, also changed it to be JS based, dropped jQuery.
Deprecated drupalgap.services.drupalgap_system.