Merge pull request #1 from asl-usgs/master

Merging changes from asl-usgs master
added missing jar files, new libraries, missing methods, edited files to remove errors. New build executes both in eclipse and the command line
Merge pull request #2 from agonzales-usgs/dev-branch

added missing jar files, new libraries, missing methods, edited files to...
Merge pull request #2 from agonzales-usgs/master

Merging changes from agonzales-usgs