One last format and content cleanup for the index page

Update the form of the links to other documents in the tree;
the generated HTML links must remain in the original form.
The layout is changed from the previous tables to a more Sphinx-y
TOC-like list.

Also editorial changes to the index page and guide titles

Change-Id: I52df0cc542754c386fb3c99d9efdf2524c11bf48
Pass through the rest of the docs

Do the link cleanups and update a handful of things that were
out of date.

Change-Id: I758027bf3577c66cfb13df963516823a5c247080
Merge "One last format and content cleanup for the index page"
Merge "Pass through the rest of the docs"