Added some debug logs to the recovery process
Added meta data and routing version to cluster state's pretty print
When sending shard start/failed message due to a cluster state change, use the master indicated in the new state rather than current

This commit also adds extra protection in other cases against a master node being de-elected and thus being null.

Closes #6189
Unified MetaData#concreteIndices methods into a single method that accepts indices (or aliases) and indices options

Added new internal flag to IndicesOptions that tells whether aliases can be resolved to multiple indices or not.

Cut over to new metaData#concreteIndices(IndicesOptions, String...) for all the api previously using MetaData#concreteIndices(String[], IndicesOptions) and removed old method, deprecation is not needed as it doesn't break client code.

Introduced constants for flags in IndicesOptions for more readability

Renamed MetaData#concreteIndex to concreteSingleIndex, left method as a shortcut although it calls the common concreteIndices that accepts IndicesOptions and multipleIndices
Shade mustache into org.elasticsearch.common package

Previously we shared the jar but never rewrote the packages such
that the shading had no effect.

Closes #6192
Randomize CMS settings in index template

This commit adds randomization for:
 * `index.merge.scheduler.max_thread_count`
 * `index.merge.scheduler.max_merge_count`

This commit also moves to use
EsExecutors#boundedNumberOfProcessors(Settings) to default
configure the default `max_thread_count` for better reproducibility

Closes #6194
Check that a plugin is Lucene compatible with the current running node using `lucene` property in `es-plugin.properties` file.

* If plugin does not provide `lucene` property, we consider that the plugin is compatible.
* If plugin provides `lucene` property, we try to load related Enum org.apache.lucene.util.Version. If this fails, it means that the node is too "old" comparing to the Lucene version the plugin was built for.
* We compare then two first digits of current node lucene version against two first digits of plugin Lucene version. If not equal, it means that the plugin is too "old" for the current node.

Plugin developers who wants to launch plugin check only have to add a `lucene` property in `es-plugin.properties` file. If you are using maven to build your plugin, you can do it like this:

In `pom.xml`:

```xml
    <properties>
        <lucene.version>4.6.0</lucene.version>
    </properties>

    <build>
        <resources>
            <resource>
                <directory>src/main/resources</directory>
                <filtering>true</filtering>
            </resource>
        </resources>
    </build>
```

In `es-plugin.properties`, add:

```properties
lucene=${lucene.version}
```

BTW, if you don't already have it, you can add the plugin version as well:

```properties
version=${project.version}
```

You can disable that check using `plugins.check_lucene: false`.
Add simple example to XContentParser how to obtain an instance of it
RecoveryID should not be a per JVM but per Node

Today the RecovyerID is taken from a static atomic long which
is essentially a per JVM ID. We run the tests within the same
JVM and that means we don't really simulate what happens in
production environments. Instead we should use a per node generated
ID.
Remove dead code
[TEST] Do not filter gz files
added install instruction with apt

Closes #6206
Use UTF-8 as string encoding
Add some finals where appropriate
Use EnumSet rather than static mutable arrays

ClusterBlockLevel uses arrays but should use EnumSets instead
Remove SoftReferences from StreamInput/StreamOutput

We try to reuse character arrays and UTF8 writers with softreferences.
SoftReferences have negative impact on GC and should be avoided in
general. Yet in this case it can simply replaced with a per-stream
Bytes/CharsRef that is thread local and has the same lifetime as the
stream.
[DOCS] Renamed the "cat" chapters to be more searchable
Allow 0 as a valid external version

Until now all version types have officially required the version to be a positive long number. Despite of this has being documented, ES versions <=1.0 did not enforce it when using the `external` version type. As a result people have succesfully indexed documents with 0 as a version. In 1.1. we introduced validation checks on incoming version values and causing indexing request to fail if the version was set to 0. While this is strictly speaking OK, we effectively have a situation where data already indexed does not match the version invariant.

To be lenient and adhere to spirit of our data backward compatibility policy, we have decided to allow 0 as a valid external version type. This is somewhat complicated as 0 is also the internal value of `MATCH_ANY`, which indicates requests should succeed regardles off the current doc version. To keep things simple, this commit changes the internal value of `MATCH_ANY` to `-3` for all version types.

Since we're doing this in a minor release (and because versions are stored in the transaction log), the default `internal` version type still accepts 0 as a `MATCH_ANY` value. This is not a problem for other version types as `MATCH_ANY` doesn't make sense in that context.

Closes #5662
Add Partial snapshot state

Currently even if some shards of the snapshot are not snapshotted successfully, the snapshot is still marked as "SUCCESS". Users may miss the fact the there are shard failures present in the snapshot and think that snapshot was completed. This change adds a new snapshot state "PARTIAL" that provides a quick indication that the snapshot was only partially successful.

Closes #5792
Switch to shared thread pool for all snapshot repositories

 Closes #6181